PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020689502.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | GeBP | ||||||||
Protein Properties | Length: 426aa MW: 46545.9 Da PI: 4.5282 | ||||||||
Description | GeBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF573 | 117.7 | 6.6e-37 | 125 | 223 | 2 | 97 |
DUF573 2 lfqrlwseeDeivlLqGlidfkaktgk..spsd.didafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelsk 93 lfqrlw++eDei++LqG+++f++++g+ +++ d+ fye++kk+++++++k+ql+eK+rrLKkK+++ v+++ sgke++f+++h+q +fe+s+ XP_020689502.1 125 LFQRLWTDEDEITILQGFLEFTTQRGTthASHQyDTGPFYEQIKKQLQLEFNKNQLIEKLRRLKKKYRNVVNRMVSGKEFAFKSAHEQATFEISR 219 79************************98867778************************************************************* PP DUF573 94 kiWg 97 kiW XP_020689502.1 220 KIWS 223 ***6 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 426 aa Download sequence |
MPPVEEEERG VFEQDDELDD SDGDDSDMED DLDDDEEEFP DVSPPPHSQP PFRPKEESNS 60 PITFLNPNPN HAAASTRTAP QNGSIKAVPI SQNDVFTPPP AHIVSAAEES RRVASAASVD 120 DSRRLFQRLW TDEDEITILQ GFLEFTTQRG TTHASHQYDT GPFYEQIKKQ LQLEFNKNQL 180 IEKLRRLKKK YRNVVNRMVS GKEFAFKSAH EQATFEISRK IWSASIKRSR DSEDDEFTPN 240 PSSAVVEFDS GFGVGTIAAD GSLSSDRKLS RSSKRRIRIR NSEQEAAAAA AAAAAAAAAA 300 AAGVAVEVPI AAPPDPPFSV PIPSIIEETV KSCLSPLFKE LLQSAMAGPQ GGLIPGIGCL 360 GGGGLLGMNP LQLGIGNLQG NLPVDEKWRN QNILELEVYL KRIELMRDQI KLTLDELKSS 420 TPSAGD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G04930.2 | 2e-42 | GeBP family protein |