PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020689448.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family NAC
Protein Properties Length: 341aa    MW: 39441.4 Da    PI: 7.1979
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020689448.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM159.41.4e-49241492128
             NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskk 96 
                     +pGfrFhPt+eel+ +yL++kvegk++++ e i+ +d+y+++Pw+Lp+ ++ +ekew+f+++rd+ky++g+r+nr+t+sgyWkatg d+ + +++
  XP_020689448.1  24 MPGFRFHPTEEELIEFYLRRKVEGKRFNV-ELITFLDLYRYDPWELPALAAIGEKEWFFYVPRDRKYRNGDRPNRVTTSGYWKATGADRMIRNEN 117
                     79***************************.89***************8778899***************************************** PP

             NAM  97 gelvglkktLvfykgrapkgektdWvmheyrl 128
                      + +glkktLvfy+g+apkg +t+W+m+eyrl
  XP_020689448.1 118 FRSIGLKKTLVFYTGKAPKGIRTSWIMNEYRL 149
                     ******************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 341 aa     Download sequence    
MAIAAAMRND EGKDVDGHEH DLVMPGFRFH PTEEELIEFY LRRKVEGKRF NVELITFLDL  60
YRYDPWELPA LAAIGEKEWF FYVPRDRKYR NGDRPNRVTT SGYWKATGAD RMIRNENFRS  120
IGLKKTLVFY TGKAPKGIRT SWIMNEYRLP QSETDRFKKA EISLCRVYKR AGVDENRRLP  180
PCKTSSLKHS TQQPSSSFTI LEEDDEIQKF DKGHIFVSNN IKLHELYPIT SSLLEEDHPS  240
LLHSNNADNS SKSSNSIVSC HPMAMGTEEV DELQRLVGYN NHSFMPQNNE IQNLQSSQYQ  300
LLHPSLNSVH VSLSTISEKL WEWNAQTAPA AAKDHYINNI K
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G02450.21e-103NAC family protein