PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020689389.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | WRKY | ||||||||
Protein Properties | Length: 254aa MW: 28058.3 Da PI: 6.6421 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 61.8 | 1.2e-19 | 106 | 169 | 3 | 59 |
-SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-S....SSTTEEEEEEES--SS- CS WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversa....edpkvveitYegeHnhe 59 Dg++WrKYGqK +++sefprsYY+Ct++ gC+++k +++++ ++p ++ Y+ +H+++ XP_020689389.1 106 DGHQWRKYGQKRIHSSEFPRSYYKCTHSkdqGCKATKTIQQKEdkisNNPPKYVVSYSVHHTCK 169 9**************************98999*******9876111146778899999999986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 254 aa Download sequence |
MAEHPFSQSS TVIDHLSRGY ERLTQLLALI SSSPANPSTT APAMVLVDKA MCCIAAALSE 60 LQTSSPRSVD SPTAAEDHRN GTDSKKSRCK KNVQSWTIVT SVPHFDGHQW RKYGQKRIHS 120 SEFPRSYYKC THSKDQGCKA TKTIQQKEDK ISNNPPKYVV SYSVHHTCKA IETHEIPIVM 180 DSLAITNEHS TSSSQAASPD LSSPVLPKPV ADIEQVSPIM DYTEPDHGEA NWFEGSGLLS 240 PFADSDIDWE RLMS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G56400.1 | 6e-20 | WRKY family protein |