PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020689368.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | WRKY | ||||||||
Protein Properties | Length: 258aa MW: 28773.2 Da PI: 7.2684 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 60.8 | 2.5e-19 | 101 | 163 | 3 | 59 |
-SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SS...STTEEEEEEES--SS- CS WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversae...dpkvveitYegeHnhe 59 Dgy+WrKYG K+++g +fprsYY+Ct++ gCp++k ++++++ +p e++Y+ +H ++ XP_020689368.1 101 DGYEWRKYGEKNIQGYKFPRSYYKCTHNkdqGCPATKTIQQKEDndcNPPKYEVIYSLHHICK 163 9**************************99999*******998752224567899999888775 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 258 aa Download sequence |
MAALPRTHTS DAIDHLSKGY EHLTQLRALL SSSPARTNTA ATAIQLLDKA LHCVTAALSE 60 LQISSSSHHA SSIENNMNCT EPCKRRRVQR WTILTSVPHF DGYEWRKYGE KNIQGYKFPR 120 SYYKCTHNKD QGCPATKTIQ QKEDNDCNPP KYEVIYSLHH ICKTMGTNTH LDKKYSSAPI 180 NNTSSTTTTS SCQANSSQPL LTLVADQLCP MESMLLSAEP QIEENGGIEN SNTKSSPSTD 240 LDFDSEWAKW LLSCTEKA |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 84 | 88 | KRRRV |
2 | 84 | 111 | KRRRVQRWTILTSVPHFDGYEWRKYGEK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G66550.1 | 2e-16 | WRKY family protein |