PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020689302.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family NAC
Protein Properties Length: 336aa    MW: 39207.9 Da    PI: 5.3529
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020689302.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM177.43.9e-5581371129
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 
                     +ppGfrFhPtdeelv +yLkkkv+++k++l +vi++vd+y++ePwdL++  ++   e++ewyfFs++dkky+tg+r+nrat +g+Wkatg+dk+v
  XP_020689302.1   8 VPPGFRFHPTDEELVGYYLKKKVASQKIDL-DVIRDVDLYRIEPWDLQErcRIGYeEQTEWYFFSHKDKKYPTGTRTNRATMAGFWKATGRDKAV 101
                     69****************************.9***************953433332667************************************ PP

             NAM  93 lskkgelvglkktLvfykgrapkgektdWvmheyrle 129
                     ++ k++l+g++ktLv+ykgrap+g+k+dW+mheyrle
  XP_020689302.1 102 HD-KKKLIGMRKTLVYYKGRAPNGQKSDWIMHEYRLE 137
                     **.999*****************************85 PP
Sequence ? help Back to Top
Protein Sequence    Length: 336 aa     Download sequence    
MDSIESCVPP GFRFHPTDEE LVGYYLKKKV ASQKIDLDVI RDVDLYRIEP WDLQERCRIG  60
YEEQTEWYFF SHKDKKYPTG TRTNRATMAG FWKATGRDKA VHDKKKLIGM RKTLVYYKGR  120
APNGQKSDWI MHEYRLETEE NAQPQEEGWV VCRAFKKRTN SQTRSSLDNW DSNYNIFPEH  180
NSRLITTFMD QYPTFSPHLN AKSLYLKQET ELEGGLTKLL QYPNHFIQLP HLESSYNSFP  240
LIKTSSSSSL SINAHSVREN EEEREGNYAV ERVTDWRELD KFVASQLSQE DGLVGDFKAE  300
EMNGSEMALL LLENGREEEG KMKENSVDDI GFCVFE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G18060.11e-125NAC family protein