PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020689098.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | NAC | ||||||||
Protein Properties | Length: 319aa MW: 36156.9 Da PI: 5.5166 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 156.4 | 1.2e-48 | 13 | 140 | 2 | 128 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk. 95 ppGfrF+Ptd+el+++yL++kv+++ + ++i+++d+yk++PwdLp ++ +e ew+fFs+r++ky++g r+nra+ gyWkatg+dk++ls+ XP_020689098.1 13 PPGFRFNPTDQELINCYLTQKVSASLPSDWNIIADIDLYKFNPWDLPGEAFFGEGEWFFFSPRERKYPNGVRPNRAAGVGYWKATGTDKPILSAg 107 9**********************999888899***************76667889**************************************96 PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrl 128 +++ +g+kk Lvfy+gr pkg kt+Wvmheyrl XP_020689098.1 108 GSHCIGVKKALVFYEGRPPKGIKTEWVMHEYRL 140 6677***************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 319 aa Download sequence |
MEGNRKVMNS HFPPGFRFNP TDQELINCYL TQKVSASLPS DWNIIADIDL YKFNPWDLPG 60 EAFFGEGEWF FFSPRERKYP NGVRPNRAAG VGYWKATGTD KPILSAGGSH CIGVKKALVF 120 YEGRPPKGIK TEWVMHEYRL LDSVVAPSQS QKQKGSMRLD EWVLCRVRQR GNFPAKSGKL 180 TETCSPTESA FTVSVQSEEK QEEEMKTTSL TYWNENQLLG YPFESQEKRE SIGEVLDPAF 240 LMRNSPLGDG YEYFDGQQQQ GSSLAIPSVF GSMKRKQSFD VLDELMLLQP GKRLQCSVDG 300 LSLPADSVSI NQWFPELFL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G61110.1 | 8e-63 | NAC family protein |