PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020689086.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family NAC
Protein Properties Length: 316aa    MW: 35490.4 Da    PI: 7.2896
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020689086.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM162.31.8e-50131411128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 
                     lppGfrFhPtd+el+ +yL+kk++++  +  ++i+e+d+yk++Pw+Lp+k+  +e ew+fFs+rd+ky++g r+nra++ gyWkatg+dk++l++
  XP_020689086.1  13 LPPGFRFHPTDQELIIHYLRKKITSSLPPSYSIIAEIDLYKFNPWELPEKAVFGEGEWFFFSPRDRKYPNGLRPNRAAACGYWKATGTDKPILAA 107
                     79***********************99999999***************87778899*************************************99 PP

             NAM  96 .kgelvglkktLvfykgrapkgektdWvmheyrl 128
                      +++  g+kk Lvfy+gr pkg+ktdW+mheyrl
  XP_020689086.1 108 nGNHCLGVKKALVFYQGRPPKGSKTDWIMHEYRL 141
                     455669**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 316 aa     Download sequence    
MMEGSGSLNG SLLPPGFRFH PTDQELIIHY LRKKITSSLP PSYSIIAEID LYKFNPWELP  60
EKAVFGEGEW FFFSPRDRKY PNGLRPNRAA ACGYWKATGT DKPILAANGN HCLGVKKALV  120
FYQGRPPKGS KTDWIMHEYR LLDQSNTSMQ QKHKGTMRLD DWVLCRVRHK GSLLPQNDEK  180
PSPSPSPPPP VTSVFIKSPA QHELRQQSAG KERNSLFELS DFQLMGYLMG CASQAESAGE  240
NSELAHCSSF FIGEHEQPEL VSSMLGSIKR KLSFGALDEL MMLPPGKRMH YFASGDQLSP  300
TEESYSDDQG CLEFLI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G61110.14e-79NAC family protein