PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020688947.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family NAC
Protein Properties Length: 318aa    MW: 36002.8 Da    PI: 5.5012
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020688947.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM1561.6e-48121401128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 
                     lppGfrFhPtd+el+++yL+kkv+++  +  ++i+++d+yk++Pw+Lp k+  +e ew+fFs+r++ky++g r+nra+  gyWkatg+dk+vls+
  XP_020688947.1  12 LPPGFRFHPTDQELINCYLTKKVAASLPSDWDIIADIDLYKFNPWELPGKACFGEGEWFFFSPRERKYPNGVRPNRAAGVGYWKATGTDKPVLSA 106
                     79*********************999988889****************77777899**************************************9 PP

             NAM  96 .kgelvglkktLvfykgrapkgektdWvmheyrl 128
                      +++ +g+kk Lvf+kgr pkg+kt+W+m+eyrl
  XP_020688947.1 107 dGTHCIGVKKALVFHKGRPPKGTKTEWIMQEYRL 140
                     56667***************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 318 aa     Download sequence    
MEVNGLVMSS QLPPGFRFHP TDQELINCYL TKKVAASLPS DWDIIADIDL YKFNPWELPG  60
KACFGEGEWF FFSPRERKYP NGVRPNRAAG VGYWKATGTD KPVLSADGTH CIGVKKALVF  120
HKGRPPKGTK TEWIMQEYRL LNSKIAPSQS QKQKGGSMRL DEWVLCRVRQ KGNLPTASVE  180
EAETCSPTES SFTVSAQSEE RQELVMNSTS FPDWNENQLL RYPFESHEER ESIGEVLDPA  240
IFIRNSQLGL SYDYFEVEQA SSPLIPSAFG SMKRKQSFDL LDELMLQQSK KRLQCSADGL  300
FSPAESVAIN QFFPDFFL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G61110.13e-72NAC family protein