PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020688893.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family WRKY
Protein Properties Length: 320aa    MW: 35221.9 Da    PI: 6.605
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020688893.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY103.11.5e-32181238259
                     --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                     +Dgy+WrKYGqK vk+s++prsYYrCt+++C+vkk+vers++dp++v++tYeg+H+h+
  XP_020688893.1 181 EDGYRWRKYGQKAVKNSNYPRSYYRCTTQKCTVKKRVERSHQDPSIVITTYEGQHTHH 238
                     8********************************************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 320 aa     Download sequence    
MSGDNKEFFH YESFFDHNYP FFSQHSGGGS GDPQGFEAPP LPYGGFTEYL QSSADYGMLS  60
KAFDLSFSTK EEAFGVPALG KESEDAVIAG VSTNENSSVM AGVGVMSVTA NSSPSSSSVE  120
VAGEEDYGAC EKDRKKNEEA GEEENGGEKD KNITKQKKKG EKRQREPRFA FMTKSEVDHL  180
EDGYRWRKYG QKAVKNSNYP RSYYRCTTQK CTVKKRVERS HQDPSIVITT YEGQHTHHCP  240
ANVRGSSHLL ANQSSAMAMP SFRAELFGRQ LTQLGLANPS ASSGYGFLQN LAAPSQQLQI  300
SNYGALLQDI MPSFVKSSQP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G18170.13e-47WRKY family protein