PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020688799.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | ERF | ||||||||
Protein Properties | Length: 178aa MW: 19715 Da PI: 4.5689 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 33.7 | 8.8e-11 | 24 | 73 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV+ + g+W Ae++ + + k+++lg + t+e+Aa ++ +++++g XP_020688799.1 24 SRYHGVSLHN--GKWKAEVYSW-----HhsKTIWLGLYATPEMAAITYDVGALAYNG 73 78*****885..******8777.....446*******************99999876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 178 aa Download sequence |
MADSTPPSQV QTSASNTKPN VPPSRYHGVS LHNGKWKAEV YSWHHSKTIW LGLYATPEMA 60 AITYDVGALA YNGGNAVFNF PDALRLHPVL KTTSITHVRA AATEVATQYG LRPKAVDASE 120 VTSQEIGEYV DEDELFYMPQ VLTDMAEGLM ISPPRLGPPE HYEPLEVVQD DNLWNFDD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G52020.1 | 9e-23 | ERF family protein |