PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_020688729.1

Organism

Dendrobium catenatum

Taxonomic ID

906689

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium

Family

NAC

Protein Properties

Length: 326aa MW: 37437.1 Da PI: 8.8509

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_020688729.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	166.7	8.2e-52	8	135	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrFhPtdeel+ +yL+k++ ++++++ +i++++iyk++Pw+Lp k+ +e+ewyfFs+rd+ky++g r+nra+ sgyWkatg+dk+++++ XP_020688729.1 8 LPPGFRFHPTDEELILHYLCKRALSTPCPV-AIIADINIYKFNPWELPGKALFGEREWYFFSPRDRKYPNGVRPNRAAGSGYWKATGTDKPITAS 101 79**************************.88***********8777899**********************************98 PP NAM 96 .kgelvglkktLvfykgrapkgektdWvmheyrl 128 +e++g+kk Lvfykg+ pkg+kt+W+mheyrl XP_020688729.1 102 qWKENIGVKKALVFYKGKPPKGVKTNWIMHEYRL 135 56778*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 326 aa Download sequence
MSNNSPSLPP GFRFHPTDEE LILHYLCKRA LSTPCPVAII ADINIYKFNP WELPGKALFG 60 EREWYFFSPR DRKYPNGVRP NRAAGSGYWK ATGTDKPITA SQWKENIGVK KALVFYKGKP 120 PKGVKTNWIM HEYRLAENLH SNQSKQLKIR EGSMRLDDWV LCRIYQKTRH HSPVDREQDD 180 DAGMKNLADS SKIHKSFSVS EFLVEEADFS LLSGLLETPM NAPLTNHDPM TNSNLNYSFT 240 NNNGNYNESC YSSQPTQSQS SVLNAENNLK RQRTLENYCF DDFGSQLNPS KKLRNSNIFA 300 QFYNPLDISQ PFFNQQLQLN PHLGMQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G04070.1	5e-89	NAC family protein