PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_020688617.1

Organism

Dendrobium catenatum

Taxonomic ID

906689

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium

Family

NAC

Protein Properties

Length: 297aa MW: 34274.1 Da PI: 9.2219

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_020688617.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	175.1	2.1e-54	8	134	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrFhPtdee++++yL kk+++++++ +i++++ +++ePwdLp+k+k ++kewyfF+++d+ky+tg r+nratk+gyWk+tgkdke+l+ XP_020688617.1 8 LPPGFRFHPTDEEIITQYLMKKIADQNFTS-VAISQANFNDCEPWDLPRKAKMGDKEWYFFCQTDRKYPTGMRTNRATKAGYWKTTGKDKEILK- 100 79***********************988.67***********99999************************************9. PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrle 129 ++++ g kktLvfykgrapkg++t+Wvmheyrle XP_020688617.1 101 GKRVLGKKKTLVFYKGRAPKGQRTNWVMHEYRLE 134 999***************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 297 aa Download sequence
MDDQSIYLPP GFRFHPTDEE IITQYLMKKI ADQNFTSVAI SQANFNDCEP WDLPRKAKMG 60 DKEWYFFCQT DRKYPTGMRT NRATKAGYWK TTGKDKEILK GKRVLGKKKT LVFYKGRAPK 120 GQRTNWVMHE YRLEGKQQVP YSLSKSPKEE WVVCKAYQNT KDKKISPAQE FSSKKNLIVD 180 DILSENPKMP PLLNSPCFNS SNQGVEGQLE LENELNRSVF SSQSYHLGPW FLHQEERRLK 240 APFISNQGCF ALSVPGRVER NGEASPAIFK QQICNLLYSS DVQAVLDFDS ILNYEIL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G18270.2	6e-82	NAC family protein