PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_020688159.1

Organism

Dendrobium catenatum

Taxonomic ID

906689

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium

Family

TALE

Protein Properties

Length: 358aa MW: 40530.9 Da PI: 9.9125

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_020688159.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	33.2	9.1e-11	162	199	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yp+ ++++ LAk++gLt +qV++WF N R + XP_020688159.1 162 FEHflHPYPTDTDKQMLAKQTGLTRNQVSNWFINARVR 199 554459******************************88 PP
2	BELL	72	1e-23	43	97	18	72
BELL 18 eVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 +V++rY+ y++q++tvi+sFe+vagl++a+pY+s+Alk +S++Fr+Lk+ i++++ XP_020688159.1 43 QVYRRYRLYYQQVETVIASFETVAGLNTAAPYISFALKSMSKNFRSLKNIISNHL 97 79*************************************************9885 PP

Sequence ? help Back to Top
Protein Sequence Length: 358 aa Download sequence
MPLQQLTAAI LQSRFRPHVR RRPYSSIYVL STIIFVFFFS TFQVYRRYRL YYQQVETVIA 60 SFETVAGLNT AAPYISFALK SMSKNFRSLK NIISNHLNNL GKINVKEGLG KGEFTGFGLT 120 ATGDHSCTQR RNSSLSFGQT QVWRPQRGLP ERAVAVLRAW LFEHFLHPYP TDTDKQMLAK 180 QTGLTRNQVS NWFINARVRL WKPMVEEIHN LEMHQLQKTV GTDHNVQNPT FQASQPSSSS 240 AATSSSNRAP VNNFMQRTSQ NQSYRPANIE QLPHIEEPYK FIFDNDFACH SQPVGVEIGG 300 NSVVSLTLGL PEPLSVNVAR RFGLEECSNA YVLGGFEGGQ ERHYGKEIGA HLLHDFVG

Sequence ? help Back to Top

Protein Sequence Length: 358 aa Download sequence

MPLQQLTAAI LQSRFRPHVR RRPYSSIYVL STIIFVFFFS TFQVYRRYRL YYQQVETVIA  60
SFETVAGLNT AAPYISFALK SMSKNFRSLK NIISNHLNNL GKINVKEGLG KGEFTGFGLT  120
ATGDHSCTQR RNSSLSFGQT QVWRPQRGLP ERAVAVLRAW LFEHFLHPYP TDTDKQMLAK  180
QTGLTRNQVS NWFINARVRL WKPMVEEIHN LEMHQLQKTV GTDHNVQNPT FQASQPSSSS  240
AATSSSNRAP VNNFMQRTSQ NQSYRPANIE QLPHIEEPYK FIFDNDFACH SQPVGVEIGG  300
NSVVSLTLGL PEPLSVNVAR RFGLEECSNA YVLGGFEGGQ ERHYGKEIGA HLLHDFVG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G27990.1	5e-58	TALE family protein