PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_020688037.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
|
||||||||
Family | ERF | ||||||||
Protein Properties | Length: 182aa MW: 19679.2 Da PI: 5.2518 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 54.4 | 3.2e-17 | 35 | 84 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 gy+G+r++ +g+Wv+eIr+ + k+ r++lg++ tae+Aa a++aa+++l+g+ XP_020688037.2 35 GYRGIRRR--SGKWVSEIRERR---KSNRIWLGTYPTAEMAAVAYDAAALALRGA 84 8****854..6*********42...459************************995 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 182 aa Download sequence |
MTPSTLKLYN NKHIFIHHSS INNLMADSSR PSAIGYRGIR RRSGKWVSEI RERRKSNRIW 60 LGTYPTAEMA AVAYDAAALA LRGADAVLNF PNAAASLPTP ASASADDIRA AAAAAAAQLG 120 SEMSVDVGIS GFIDEEELFD MPKLLVNMAE GMLLSPPRLT PAASYDLSEV DSHGENLWNF 180 DE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G52020.1 | 2e-21 | ERF family protein |