PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020687912.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | ERF | ||||||||
Protein Properties | Length: 188aa MW: 20706.1 Da PI: 5.3398 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 53.9 | 4.3e-17 | 46 | 95 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 ykGVr + rWv+e+r+p +k+ r++lg+f tae+Aa+a++ a+++l+g XP_020687912.1 46 IYKGVRCRN-ADRWVCEVREP---NKKSRIWLGTFPTAEMAARAHDVAALALRG 95 69***9666.9******9998...347*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 188 aa Download sequence |
MDSSSSSASP AAHLTSSDDP PYMTVSSAPP KRRAGRTKFR ETRHPIYKGV RCRNADRWVC 60 EVREPNKKSR IWLGTFPTAE MAARAHDVAA LALRGRQACL NFADSAWRLP APESSSPRDI 120 QRAAAQAAEA FRPDPPEKSV PSDDPFYMEF GMQEYLDMAE GLLIDPPAMV SEDEGGSASD 180 GDLSLWNY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G25490.1 | 1e-49 | ERF family protein |