PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020687905.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | ERF | ||||||||
Protein Properties | Length: 216aa MW: 23871.3 Da PI: 4.3985 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 57 | 4.8e-18 | 30 | 79 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +y GVr+++ +gr+++eIrdp + + r++lg+f+taeeAa a+++a+++l+g XP_020687905.1 30 RYLGVRRRP-WGRYASEIRDPAT---KERHWLGTFDTAEEAAVAYDRAARSLRG 79 588******.**********843...4*************************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 216 aa Download sequence |
MDLSHLFSSH SSPSQPNPTQ NLLHQTTNQR YLGVRRRPWG RYASEIRDPA TKERHWLGTF 60 DTAEEAAVAY DRAARSLRGP RARTNFAYPD LPLGSSLTPF LSPDLPSPQP FFTMSPAPPQ 120 LLPSVTFLPS HQQLPAVVEE ESNIVVPGSH DCFSNEGALL DSGEFSGFGT VEEEISFFDE 180 GYLDSSLFGP MPEASEYSNI SVDDYQLGGS SSSYFF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G28160.1 | 7e-29 | ERF family protein |