PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020687817.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | ERF | ||||||||
Protein Properties | Length: 233aa MW: 26398.1 Da PI: 10.1492 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 36.6 | 1.1e-11 | 109 | 149 | 3 | 50 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaar 50 +GV++ k+ +W A I++ +k+++lg+ g+ eeAa+++++a+ XP_020687817.1 109 MRGVYF--KNMKWQAAIKVD-----KKQIHLGTVGSQEEAARLYDRAA 149 79**98..47*********4.....5********************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 233 aa Download sequence |
MVSIRRRRLL GLCSGKNSIP VELPGPIEGS NTVENLNKNV KPFSIHPMPS VASNHEKPVN 60 LSETSFGAST VSSFRSPKLE TNNYFPGKEI KRRRRHRRKY YEDQEPCIMR GVYFKNMKWQ 120 AAIKVDKKQI HLGTVGSQEE AARLYDRAAF LCGREPNFEL SEEEKKELSQ YKWDEFLAMT 180 RTAITSKKHQ RRAGVGRRKK LGIESQGSDM EPEKGAGGMS SMSDDGEMET AAL |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 187 | 201 | KKHQRRAGVGRRKKL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G13040.2 | 2e-40 | ERF family protein |