PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020687609.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family NF-YB
Protein Properties Length: 182aa    MW: 19729 Da    PI: 6.6795
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020687609.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB180.91.1e-5626121297
           NF-YB   2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelege 96 
                     reqdr+lPianvsrimkk+lPanakisk+aketvqecvsefisf+t+easdkcqrekrktingddllwa++tlGfedy+eplk+yl+k+releg+
  XP_020687609.1  26 REQDRLLPIANVSRIMKKALPANAKISKEAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEDYAEPLKLYLQKFRELEGD 120
                     89********************************************************************************************9 PP

           NF-YB  97 k 97 
                     k
  XP_020687609.1 121 K 121
                     7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 182 aa     Download sequence    
MADSDNESGG HNNSGGAINS EFSSPREQDR LLPIANVSRI MKKALPANAK ISKEAKETVQ  60
ECVSEFISFI TGEASDKCQR EKRKTINGDD LLWAMTTLGF EDYAEPLKLY LQKFRELEGD  120
KGASSTQSQQ KEEFSAGGMM MMGQHMYGSY HPQHHNMVGK GGMASGGGNS SSSAGIGRQG  180
RV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G14540.13e-73NF-YB family protein