PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020687532.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 253aa MW: 29139.1 Da PI: 7.9855 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 98.2 | 3.3e-31 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krienk+nrqvtfskRr g+lKKA+E+S+LCdaeva+iifs++gklyeys+ XP_020687532.1 9 KRIENKINRQVTFSKRRSGLLKKAHEISILCDAEVALIIFSTKGKLYEYST 59 79***********************************************96 PP | |||||||
2 | K-box | 91.5 | 1.5e-30 | 81 | 174 | 7 | 100 |
K-box 7 ksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100 +++e + + +qe+ kLk++ie Lq++ hl+Ge+Le+LslkeLq+LeqqLe++lk+iRs++++lll++i elq+kek+l e+n L+kk+ e XP_020687532.1 81 QNTEPESQGDICQEYGKLKNKIEALQKSRSHLMGEKLETLSLKELQHLEQQLETALKHIRSQRTQLLLNSIAELQRKEKSLLEHNSLLEKKITE 174 44555667789********************************************************************************976 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 253 aa Download sequence |
MGRGRVQLKR IENKINRQVT FSKRRSGLLK KAHEISILCD AEVALIIFST KGKLYEYSTD 60 SCMDRILEHY ERYCYAEKAL QNTEPESQGD ICQEYGKLKN KIEALQKSRS HLMGEKLETL 120 SLKELQHLEQ QLETALKHIR SQRTQLLLNS IAELQRKEKS LLEHNSLLEK KITENESTTA 180 MTQDTKRKQQ RQEQESSSPP PFINDIPTLN LGTYPVSHGE EVAEPPLTRV NSNSLPPWML 240 RSITLEDNES YAA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G60910.1 | 1e-67 | MIKC_MADS family protein |