PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020687524.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 278aa MW: 32015.4 Da PI: 7.8571 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 98 | 3.8e-31 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krienk+nrqvtfskRr g+lKKA+E+S+LCdaeva+iifs++gklyeys+ XP_020687524.1 9 KRIENKINRQVTFSKRRSGLLKKAHEISILCDAEVALIIFSTKGKLYEYST 59 79***********************************************96 PP | |||||||
2 | K-box | 90.5 | 3e-30 | 81 | 172 | 7 | 98 |
K-box 7 ksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 +++e + + +qe+ kLk++ie Lq++ hl+Ge+Le+LslkeLq+LeqqLe++lk+iRs++++lll++i elq+kek+l e+n L+kk+ XP_020687524.1 81 QNTEPESQGDICQEYGKLKNKIEALQKSRSHLMGEKLETLSLKELQHLEQQLETALKHIRSQRTQLLLNSIAELQRKEKSLLEHNSLLEKKV 172 44555667789******************************************************************************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 278 aa Download sequence |
MGRGRVQLKR IENKINRQVT FSKRRSGLLK KAHEISILCD AEVALIIFST KGKLYEYSTD 60 SCMDRILEHY ERYCYAEKAL QNTEPESQGD ICQEYGKLKN KIEALQKSRS HLMGEKLETL 120 SLKELQHLEQ QLETALKHIR SQRTQLLLNS IAELQRKEKS LLEHNSLLEK KVRSCDTNEI 180 TLKREIKGHY CDIATQITEN ESTTAMTQDT KRKQQRQEQE SSSPPPFIND IPTLNLGTYP 240 VSHGEEVAEP PLTRVNSNSL PPWMLRSITL EDNESYAA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69120.1 | 5e-66 | MIKC_MADS family protein |