PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020687518.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family WRKY
Protein Properties Length: 638aa    MW: 69265.8 Da    PI: 5.1259
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020687518.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY100.31.2e-31261317259
                     --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                     +DgynWrKYGqK+vkgsefprsYY+Ct+++C+vkkkve s+ d++++ei+Y+g+Hnh 
  XP_020687518.1 261 KDGYNWRKYGQKQVKGSEFPRSYYKCTYPNCEVKKKVELSQ-DGHATEIIYKGTHNHL 317
                     7***************************************9.***************5 PP
2WRKY98.63.9e-31429486158
                     ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS CS
            WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnh 58 
                     ldDgy+WrKYGqK+vkg+++prsYY+Ct +gC+v+k+ver+a d k v++tYeg+H h
  XP_020687518.1 429 LDDGYRWRKYGQKVVKGNPNPRSYYKCTNPGCKVRKHVERAAYDVKSVITTYEGKHSH 486
                     59*******************************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 638 aa     Download sequence    
MAGMDDDVSA FDDWLPSSIS PKTLFSDDSS QKTNDGSLSE PRKPGVVVND SNQDCATGIQ  60
VSEEYSTELN TYNVPKSSTR GALSKRIAGR AGFGNLTLDT SQIRKTSFDS PSTNDRSPLI  120
TIPPGLSPTM LLDSPNLVSN SLIEPFRSTD KMDCMVCDNI GAAINGDNID HATEDIDPPL  180
PSFKLPLLPF SCAESTPELS IHPQQPNPQD GFSTLSKEKG STDTLNSNLN SNHVPILDDP  240
QEGDDGPKGE FTSAFLVAPT KDGYNWRKYG QKQVKGSEFP RSYYKCTYPN CEVKKKVELS  300
QDGHATEIIY KGTHNHLKSS IPLSHSGNDL QIDELDPNQY ASVPIEQCEQ SSPYAETPDG  360
ADASSFLSND DEDEQETHGS ASPDRDSDGD ETESKRRKLD ACALEMNAAS RAVREARVVV  420
QTTSEIDILD DGYRWRKYGQ KVVKGNPNPR SYYKCTNPGC KVRKHVERAA YDVKSVITTY  480
EGKHSHVVPT ARTSNQASSS TASIITTAAS PSSCLLQKKA EAARMADCLG RFDTPAPLGP  540
FGLPSRDQQL GPAVPNFSYA RALQGFNPNV AMAGLGNQTF KMSVLPPLPA YMSQNHPGTV  600
GYVVQTIMAK EEPAVNSRPP VPGNLSVYHS LSRRPMGP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56270.12e-99WRKY family protein