PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020687442.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family C2H2
Protein Properties Length: 393aa    MW: 44988 Da    PI: 10.2611
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020687442.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.50.00044343362323
                     ETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   3 CpdCgksFsrksnLkrHirtH 23 
                     C+ Cgk+F  ++ L++H++++
  XP_020687442.1 343 CSQCGKPF-KPEKLHSHMKSC 362
                     ********.**********98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 393 aa     Download sequence    
MSNSRKNKSE KAKQVCEEMD GNRRREGGGG GGGGGETRRI HVVYFLSRNG KTEQPHLIRV  60
HHLNNNGVHL RDVKRWLSEL RGREMPESFS WSYKRSYKAG HIWQDLTDND LISPFSDNEY  120
ILKGSLIPSQ HNKAVEQFFP FNGRSTSSTR KQDREEEDEV EDENELEEEE EEISYESLQI  180
EDNISPKPPP RGDDEESPLR PVPSTSTSSE EAIKNHTAAK SKRREEMKKE GDQEKSCNEA  240
VIKKSGSNVN RSNSKGRRRE VRPRRRAADI LRNLLRCRLV DIKDSLKRES RQRNGSISRK  300
NYQTSNSNNE RKNWGKKGSN GGSRKMTEKS ASVRYKPSTE PNCSQCGKPF KPEKLHSHMK  360
SCMALKEKGR SSSFKKEEQT AARRPSKVTV TVL