PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020687329.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | MYB | ||||||||
Protein Properties | Length: 258aa MW: 28568.1 Da PI: 7.0181 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 60.2 | 4.6e-19 | 10 | 55 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+WT++Ede l +v+++G+++W++I++ ++ gR++k+c++rw + XP_020687329.1 10 KGPWTPDEDEMLQTLVEKHGPKNWSLISQSIP-GRSGKSCRLRWCNQ 55 79******************************.***********985 PP | |||||||
2 | Myb_DNA-binding | 61 | 2.6e-19 | 64 | 106 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++T+eEde++v a++++G++ W+tI+r ++ gRt++++k++w++ XP_020687329.1 64 PFTPEEDEIIVSAHHRFGNK-WATISRLLP-GRTDNNIKNHWNST 106 89******************.*********.***********986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 258 aa Download sequence |
MAANDVDPIK GPWTPDEDEM LQTLVEKHGP KNWSLISQSI PGRSGKSCRL RWCNQLSPKV 60 EHRPFTPEED EIIVSAHHRF GNKWATISRL LPGRTDNNIK NHWNSTLKRK QAAVAAVASA 120 SEERMTGAFE DCRLIKRPNS PETDSNTRSP NRHDPFTSLT LSPPGSSSDK YQSAVNQKHS 180 DPQFLASPSA TTLAARTTTP EEKLPPAVAF PFSPEFLEAM QEVIHQEVQN YMSGLEHQGM 240 IPPPPPPTPP TPPTPPPP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G23290.1 | 7e-61 | MYB family protein |