PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020687328.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | NAC | ||||||||
Protein Properties | Length: 384aa MW: 43029.4 Da PI: 7.4996 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 110.9 | 1.5e-34 | 47 | 190 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk.......leleev.ikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra........t 78 lp+G++F+Ptd+el+ e+L+ kv+ + ++++ i+ +i++++P++Lp v+ + + +fF++ +k+y+tg+rk+r+ XP_020687328.1 47 LPAGVKFDPTDQELI-EHLEGKVSIEGlirshplIDEFIPtIEGEdGICYTHPEKLP-GVTRDGLSKHFFHRPSKAYTTGTRKRRKiqpetdirR 139 799************.99******99977776553333333766646**********.555666799******************8567766443 PP NAM 79 ksgyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128 + +W++tgk+++v++ +g+++g+kk+Lv+y g+++k+ekt+Wvmh+y+l XP_020687328.1 140 GETRWHKTGKTRAVMA-NGKQKGCKKILVLYtnFGKHRKPEKTNWVMHQYHL 190 3778************.999***********5547999999*********98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 384 aa Download sequence |
MRRSHIVSSS SSANLIDAKL EEHQMRGSKQ CPNCGHQIEN KPDWFGLPAG VKFDPTDQEL 60 IEHLEGKVSI EGLIRSHPLI DEFIPTIEGE DGICYTHPEK LPGVTRDGLS KHFFHRPSKA 120 YTTGTRKRRK IQPETDIRRG ETRWHKTGKT RAVMANGKQK GCKKILVLYT NFGKHRKPEK 180 TNWVMHQYHL GEMEEEKEGE LVVSKIFYQT QPRQCGAVGG GEGIGIGNCS SSKLVVDAGT 240 AAVYSGIEQL QLQQMRQNDD LSFGTFRKSF DEVGLGERAA DHSSEASISR PTNSISGLIS 300 PATVQQASIV LEDPYHVSRF LFQADKFQQQ QHKMVGRPAG AGLEELIMSC TSTDIKPETS 360 IAHPQETEWL KYSYWLPDSH DHHG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G29230.1 | 1e-116 | NAC family protein |