PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020687244.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | ERF | ||||||||
Protein Properties | Length: 205aa MW: 22548.6 Da PI: 7.6764 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 48.7 | 1.9e-15 | 47 | 97 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 + y+GVr ++ g+Wv+e+r+p++ ++r++lg++ +e+Aa+a++ a+++l+g XP_020687244.1 47 PVYRGVR-ERNGGKWVCEVREPRT---KTRIWLGTYSAPEMAARAHDVAALALRG 97 68****9.7779*********854...4*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 205 aa Download sequence |
MDSSDSFSTS ASSSSDHAPS PSSFSSSPSP PPKRKSGRKK FRVTRHPVYR GVRERNGGKW 60 VCEVREPRTK TRIWLGTYSA PEMAARAHDV AALALRGKSA FLNFPDSAWA LPVPRSTRPD 120 DIRLAAVKAA EMYKTRPAAS TVLSSLAPPS VAVLDEEDVF NIPELMMEMA AGMLITPPGM 180 VGGFDWDAAE LVEEEMPLWQ HDFWN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G63030.2 | 3e-41 | ERF family protein |