PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020687212.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family ERF
Protein Properties Length: 333aa    MW: 36879.2 Da    PI: 6.1677
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020687212.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.93.3e-20156204355
             AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     ++GVr+++ +g+WvAeIr p++   r+r +lg+f+taeeAa a+++a+ +l+g
  XP_020687212.1 156 FRGVRQRH-WGKWVAEIRLPRN---RTRLWLGTFDTAEEAAMAYDKAAYRLRG 204
                     8******9.**********955...5*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 333 aa     Download sequence    
MAAAIDLQNS WPFNSSDSSG EELMQALEPF IKRASFSSPS PPSPCLAYSP PQAPTFSSSS  60
SSTFYPSFSS SSTLFQNSIL DCPSSSIGLT HLNPDQIQQI QAQFHLQQQN QMQNHILLDN  120
VQGLPPTLPQ RQSFLSPRPA PMKHTTATPP KPLKLFRGVR QRHWGKWVAE IRLPRNRTRL  180
WLGTFDTAEE AAMAYDKAAY RLRGDSARLN FPNLRQNGSH LGTPLHASID AKLQVICEEL  240
AKAPAKQASG AVLKRISLQK SDVDAPLAAE NKSESSIEET ELSFSSSSTS SQASSPVSEM  300
DQLDFTEAPW DESENFVLRK YPSWEIDWDS ILS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G22190.11e-49ERF family protein