PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_020687015.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
|
||||||||
Family | ERF | ||||||||
Protein Properties | Length: 191aa MW: 21091.7 Da PI: 9.5205 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 55.8 | 1.1e-17 | 51 | 100 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GVr + +g+Wv+eIr+p++ + r++lg+f tae+Aa+a++ a + ++g XP_020687015.1 51 TYRGVRMRN-WGKWVSEIREPKK---KSRIWLGTFPTAEMAARAHDVASLTIKG 100 69****998.**********854...6*******************99887766 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 191 aa Download sequence |
MEQSLPHQCQ SLLSPSSSSS SSSSCSSSSS SPKPEESIKP KKRSREGKHP TYRGVRMRNW 60 GKWVSEIREP KKKSRIWLGT FPTAEMAARA HDVASLTIKG QSAYLNFPHL AAEFPRPATT 120 SPKDIQAAAA KAAAFTDHQA ALPKPTPPPI TPPSTTDEDS AFLDLPDLLD LRASWVSLWT 180 DELNSRFVWE Y |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G11590.1 | 9e-47 | ERF family protein |