PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020686997.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | MYB | ||||||||
Protein Properties | Length: 235aa MW: 27031.3 Da PI: 5.0978 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 56.2 | 7.7e-18 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd +lv +++++G ++W++ ++ g+ R++k+c++rw +yl XP_020686997.1 14 KGPWTPEEDRILVSYIQRYGHDNWRALPKQAGLSRCGKSCRLRWTNYL 61 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 50.8 | 3.8e-16 | 67 | 112 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg +++eE+e ++ ++++lG++ W++Ia++++ gRt++++k+ w++yl XP_020686997.1 67 RGDFSKEEEETIIYLHALLGNR-WSAIAAKLP-GRTDNEIKNVWHTYL 112 899*******************.*********.*************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 235 aa Download sequence |
MVKAACCDEM GLKKGPWTPE EDRILVSYIQ RYGHDNWRAL PKQAGLSRCG KSCRLRWTNY 60 LRPDVKRGDF SKEEEETIIY LHALLGNRWS AIAAKLPGRT DNEIKNVWHT YLKKRLNPNQ 120 AIKESKRRSR NNAVNKEVKK NDLEEQVSPA CSQSDASSFV ITTENFNGWW KEDSMDFLTE 180 LPEIDEILMS GVQTASQNWA GDEEEEDSTA IPSNEDDIRF WLNLLAEAGN LECFK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G31180.1 | 3e-71 | MYB family protein |