PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020686975.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | ZF-HD | ||||||||
Protein Properties | Length: 200aa MW: 21603.9 Da PI: 8.0695 | ||||||||
Description | ZF-HD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | ZF-HD_dimer | 80.1 | 2.7e-25 | 13 | 64 | 5 | 58 |
ZF-HD_dimer 5 rYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRreve 58 Y eC++NhAa+lG++a DGCgEf ++ + + +a+ C+ACgCHRnFHR+ + XP_020686975.1 13 LYGECMRNHAAALGAYASDGCGEFAAD--DISLPATYFCSACGCHRNFHRKLFD 64 6************************98..5578*****************9765 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 200 aa Download sequence |
MSKRSYRELP WKLYGECMRN HAAALGAYAS DGCGEFAADD ISLPATYFCS ACGCHRNFHR 60 KLFDTSGYSS HFPPETAAVA VSDNRSDGRR RSRTKFTAEQ KAQMKSFAER LGWRMPKRPE 120 AEEELEVERF CNEIGVSRHV FRVWMHNHKG GGGGCGAGGV AAPANSSSAT NNSDGVVVGG 180 GGGAGESEER DGDRKSTTAV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G60480.1 | 4e-29 | ZF-HD family protein |