PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_020686628.1

Organism

Dendrobium catenatum

Taxonomic ID

906689

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium

Family

NAC

Protein Properties

Length: 392aa MW: 44258 Da PI: 5.4538

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_020686628.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	91.9	1.1e-28	57	196	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk....leleevikevd....iykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra.....tksgy 82 lp+G++F+Ptd el+ e+L+ k+ + ++e+i+++d i+ ++P++Lp ++++ ++++fF+++ ++y+tg+rk+r+ +s + XP_020686628.1 57 LPAGVKFDPTDVELL-EHLAGKIGVGIakahIFIDEFIPTLDgeqgICCTHPENLP-GARKDGTSVHFFHRSLNAYSTGNRKRRKicgeaEESVR 149 799**********.9999876653333444445666656666********.55667899***************75666555899 PP NAM 83 WkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128 W++tgk+k+v++ +g l+g kk++v+y g+ +k+ k++Wv+h+y+l XP_020686628.1 150 WHKTGKTKPVIE-NGILKGWKKIMVLYtsFGKGNKPDKAKWVLHQYHL 196 ********.99********6547888888*******98 PP

Sequence ? help Back to Top
Protein Sequence Length: 392 aa Download sequence
MARAWLTNCR GIAKKVKNAT SYSNYQLCDL GAEANRECPN CQHIIDNSDV SLELPGLPAG 60 VKFDPTDVEL LEHLAGKIGV GIAKAHIFID EFIPTLDGEQ GICCTHPENL PGARKDGTSV 120 HFFHRSLNAY STGNRKRRKI CGEAEESVRW HKTGKTKPVI ENGILKGWKK IMVLYTSFGK 180 GNKPDKAKWV LHQYHLGMDE EEKDGQLVVS KIFFQQTKQM ESNETDENVQ EKPNVLATRY 240 SPRTPKTMTP RPHRSKMNPL YKANEEVPLL LEVQEEQAPE SELPPSTLPT VNLKDEETGS 300 HYWAGESQAI DEPNPQLLNE SFLYHEVLKQ FPPLAESPLQ LHQPDMLIGC KDQFFMYADG 360 FPSLDDIEVD TPPDFQLSDL QFSSQDSWLG RL

Sequence ? help Back to Top

Protein Sequence Length: 392 aa Download sequence

MARAWLTNCR GIAKKVKNAT SYSNYQLCDL GAEANRECPN CQHIIDNSDV SLELPGLPAG  60
VKFDPTDVEL LEHLAGKIGV GIAKAHIFID EFIPTLDGEQ GICCTHPENL PGARKDGTSV  120
HFFHRSLNAY STGNRKRRKI CGEAEESVRW HKTGKTKPVI ENGILKGWKK IMVLYTSFGK  180
GNKPDKAKWV LHQYHLGMDE EEKDGQLVVS KIFFQQTKQM ESNETDENVQ EKPNVLATRY  240
SPRTPKTMTP RPHRSKMNPL YKANEEVPLL LEVQEEQAPE SELPPSTLPT VNLKDEETGS  300
HYWAGESQAI DEPNPQLLNE SFLYHEVLKQ FPPLAESPLQ LHQPDMLIGC KDQFFMYADG  360
FPSLDDIEVD TPPDFQLSDL QFSSQDSWLG RL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G25580.1	3e-83	NAC family protein