PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020686491.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family BES1
Protein Properties Length: 311aa    MW: 33768 Da    PI: 8.9829
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020686491.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822213.36.1e-6641532145
          DUF822   2 gsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpl...eeaeaagssasaspess 93 
                     g+gr+ptwkErEnnkrRERrRRaiaaki++GLRa Gn+klpk++DnneVlkALc+eAGwvvedDGttyrkg+k +    e +++  sa++ p+ss
  XP_020686491.1   4 GGGRMPTWKERENNKRRERRRRAIAAKIFTGLRALGNFKLPKHCDNNEVLKALCAEAGWVVEDDGTTYRKGCKLPlpqPEIATGAPSANIRPCSS 98 
                     89***********************************************************************877434444455688899***9 PP

          DUF822  94 lq.sslkssalaspvesysaspksssfpspssldsislasa..asllpvlsvlsl 145
                     ++ +s+ ss+++spv+sy+asp+sssfpsp++l++ ++ s   + llp+l++ls+
  XP_020686491.1  99 SHqLSPPSSSFPSPVPSYQASPASSSFPSPTRLENHNNPSVtpSYLLPFLRNLSS 153
                     999******************************9998876677999999999987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 311 aa     Download sequence    
MTSGGGRMPT WKERENNKRR ERRRRAIAAK IFTGLRALGN FKLPKHCDNN EVLKALCAEA  60
GWVVEDDGTT YRKGCKLPLP QPEIATGAPS ANIRPCSSSH QLSPPSSSFP SPVPSYQASP  120
ASSSFPSPTR LENHNNPSVT PSYLLPFLRN LSSLPPLRIS NSAPVTPPPS SPTSSRPFKL  180
MKPDWDYAAV AAVAYHHPLF AASAPASPTR GRHPLHPATI PECDESDAST IDSGRWVSFQ  240
NTAPASPTFN LINPAAAMPE SALVEKSGRM VSDFEFESRR VKPWEGERIH EVGAEEDDLE  300
LTLGLGSARA K
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75080.21e-58BES1 family protein