PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020686363.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family C3H
Protein Properties Length: 418aa    MW: 47652.2 Da    PI: 9.2311
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020686363.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH19.51.7e-06358379326
                     S---SGGGGTS--TTTTT-SS-SS CS
         zf-CCCH   3 telCrffartGtCkyGdrCkFaHg 26 
                      + Cr+f++   C++ d+CkFaH+
  XP_020686363.1 358 VSVCRDFLK-KACQR-DSCKFAHP 379
                     678******.*****.*******8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 418 aa     Download sequence    
MASDDSLHLS SLSPRRKRER SPSLSSSSGS DNAKASRRQR RRHDLSVEVC KEFIRRACRR  60
AEIACKFAHP PSTVTIERGK VIACADSLHN RCFRGRTCRY FHPPPHILES LLKSIGMEDT  120
KHLMRQRSPS QSPTYDGDNA ESSPRQRRLH DLSVEVCKDF IRSGCRRAEI DCKFAHPPSG  180
VAIERGKVIA CIDSLRGECI RGRTCPYYHP PAQIQESLLK AMGMEDTKNP MALQYLGSSV  240
KLPSYTQPGN DQEFIPVCRD FLKNACNRRS CKYAHPDSHA TGQLQHHGLS LLENGAIPNA  300
TVLYQDVVPV CKDFLKNACN RDHCKYFHLI PQSEVYLQQH ETFVKLHGSS LETEQKRVSV  360
CRDFLKKACQ RDSCKFAHPN SRTKVVDNQV EICHDFRRGL CHRTNCRFYH PHTRSAEK
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
13742RRQRRR