PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020686106.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | bHLH | ||||||||
Protein Properties | Length: 231aa MW: 25578.8 Da PI: 9.7495 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 30.5 | 6.6e-10 | 67 | 115 | 3 | 54 |
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 +++ rE+ RRdr+N++f eL ++l + + +K +Ka iL A + + +L XP_020686106.1 67 KSKACREKMRRDRLNERFLELSSILDPG---KLPKSDKAGILSDAARVLAQL 115 56789**********************9...9**************999888 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 231 aa Download sequence |
MTPEVDQTAS YAVPSRASAM FRHRPLDLVS RRCTGMAVVW SRSGLGKGCF SIFIPCRLRD 60 EACCGSKSKA CREKMRRDRL NERFLELSSI LDPGKLPKSD KAGILSDAAR VLAQLKSEAE 120 QLKEANKKLQ ETIKQLKVEK NELRDDKLGL KLEKEKLELQ VKTTGTPTAG LMPPTIAVHP 180 ASGPAIYKAH GEAPAKEVAP LNAFPCLAMW QWLPPAFLDT THDPKLWPPH A |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G54680.1 | 3e-44 | bHLH family protein |