PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020685796.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | NAC | ||||||||
Protein Properties | Length: 981aa MW: 110218 Da PI: 5.1783 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 31 | 7.5e-10 | 42 | 125 | 50 | 128 |
NAM 50 kvkaeekewyfFskrdkkya..tgkrknr..atksgyWkatgkdkevlskkgelvglkktLvfykg..rapkgektdWvmheyrl 128 +++++ + yfF+++ + ++ + kr+++ + W++ gk++ v++ +g + g k++L +y + + ++ kt W+mh+y + XP_020685796.1 42 NFYQDGSASYFFHRKIEMHRsrNFKRQKKqdNSVEICWNSIGKSNLVCV-DGIHQGSKEVLSLYMNtvTGGNPLKTPWLMHQYCI 125 455667789*****99887733233444412344677********9999.999***********6522555566*********75 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 981 aa Download sequence |
MKSFSGTCLQ KWEKEWLNDI LLLMNLSFHL MKMLGWAMFF LNFYQDGSAS YFFHRKIEMH 60 RSRNFKRQKK QDNSVEICWN SIGKSNLVCV DGIHQGSKEV LSLYMNTVTG GNPLKTPWLM 120 HQYCIGINET EEDLVVSKIF YEISSNQDIQ DSRTDSVHGL VAAVVGVADS LQVAPEFHER 180 LHADSVSADA SSQAVELGIG GETNIKVVDY LKSASCQKPP IKYLEKAKTN LDKNSDGTLA 240 TDELALLESA CETAAEISIF CTSAKSEIRD EDQECVVEKR ADDFQSNLGD CGNWINNYNY 300 NEVIDDTCDS NDTQVSMEKS CPKIVPEHDL QKNISDKMFR TQGRFIPTKS REFNTTGIYS 360 FAGHISRERH ETYSKCLDEA HVSPNSIPSA EHNITHENSI NSLFILGLPA YSLKGKPSKE 420 TEPIISFENN SNNWVNISAQ SALPIKIEPK SFVDTEIDIA SEKFSSNRLN VSAPSVMIIK 480 VKNEPFEEVE ASNVLEKYVE KHSSFSQLSC PEEGAPSCNL SHLTYVPKDP RIPSAEILNT 540 MISGLDKLLS ETTGLMNHHH EEDDNVHDGL LMSNDNSQVI GDTECFNQSS YAQINVHTGE 600 PQSNSVSTSS SLNVKSEPVE SSLLSCSQIP PCNTRGHVLL TFENKKELCS DFQPDVLDHV 660 PLKLRLGISV SEDDVNVKNG NISEEIAPVT PACRSFGSVN TKECLSSSRR KRKRKKIATD 720 SVEKAMEEDA PGLLKVLLDR GIQVEEIKLY GDLEDNDPLE TSSSEGGFEE LETVMTKLFS 780 ERSSLLRFAS GRPVKGARAV YCLAGLISLI EQARYLRFRQ IPIDWGWCRP LQSFIFVFQT 840 HNRIVLERPE YGYATYFFEL VDSLPIDWQI RRLVMAMKLT NFSRTILLEN KPLIVGEDLS 900 EGEALVLEAY GWARNTGFGT LLNYRDRVVH DRRNVILSEW RAKIGKLLMN GYTGGRMVLA 960 NFPKKVVEYL GNLSSEIKME L |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 709 | 714 | RRKRKR |
2 | 709 | 715 | RRKRKRK |
3 | 710 | 715 | RKRKRK |
4 | 710 | 716 | RRKRKRK |
5 | 712 | 716 | RKRKK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G25580.1 | 3e-18 | NAC family protein |