PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_020685580.1

Organism

Dendrobium catenatum

Taxonomic ID

906689

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium

Family

NAC

Protein Properties

Length: 293aa MW: 32750.7 Da PI: 8.3014

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_020685580.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	105.6	6.4e-33	56	196	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk......leleevikevd....iykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk...... 79 lp+G++F+Ptd+el+ e+L+ k++ + + +e+i+++d i++++P++Lp v+ + +fF++ +k+y+tg+rk+r+++ XP_020685580.1 56 LPAGVKFDPTDQELL-EHLEGKARPDLqklhplI--DEFIPTIDgengICYTHPEKLP-GVTRDGLIRHFFHRPSKAYTTGTRKRRKVHtddhgg 146 799**********.9999887664454332..233554444445********.454555677**************744456655 PP NAM 80 sgyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128 + +W++tgk+++v+ +g+++g kk+Lv+y g+++k+ekt+Wvmh+y+l XP_020685580.1 147 ETRWHKTGKTRPVFI-NGKVKGYKKILVLYtnYGKQRKPEKTNWVMHQYHL 196 778********.999*******6657999999*******98 PP

Sequence ? help Back to Top
Protein Sequence Length: 293 aa Download sequence
MTWCSGCNDD DDDHDRPAHG DKSSSSPMIA RICSSCGHRV HLDDQVGSAI QDLPGLPAGV 60 KFDPTDQELL EHLEGKARPD LQKLHPLIDE FIPTIDGENG ICYTHPEKLP GVTRDGLIRH 120 FFHRPSKAYT TGTRKRRKVH TDDHGGETRW HKTGKTRPVF INGKVKGYKK ILVLYTNYGK 180 QRKPEKTNWV MHQYHLGSNE EEKDGELVVS KVFYQTQPRQ CGSTIMTTKD STTKMKSKGV 240 NGDQDSSILK EACIVDYYSS SLISYNQGGN HRASSPHLIP NFGVHGGGSS FLH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G28500.1	1e-117	NAC family protein