PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020685544.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | ERF | ||||||||
Protein Properties | Length: 244aa MW: 27139.9 Da PI: 9.5261 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 57 | 4.9e-18 | 85 | 134 | 3 | 56 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 y+GVr++ +g+WvAeIr p + r r +lg++++ae Aa a+++a+ kl+ge XP_020685544.1 85 YRGVRQRN-WGKWVAEIRLPQN---RMRLWLGTYDSAESAAYAYDRAAYKLRGE 134 9****998.**********954...59*************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 244 aa Download sequence |
MESPTPFTSP GEINSTLSSI LLSGTNAIDS IFSHLPPPTT LSPTAEPLGS SVYLRQTELL 60 LRFGYQNRVA AAAAEEAAMK KKKMYRGVRQ RNWGKWVAEI RLPQNRMRLW LGTYDSAESA 120 AYAYDRAAYK LRGEYARLNF PELRDAGVDC SDKLRALRLA VDSKIQAVCQ RLSKQRRLKR 180 SGGVGERVEK KGEERKTTSE SPFSVSVNQS LIMAEVGGEM DGGECSLARM PSFDVELIWE 240 VLAN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G64380.1 | 8e-37 | ERF family protein |