PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020685308.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | NAC | ||||||||
Protein Properties | Length: 168aa MW: 19474.2 Da PI: 10.5153 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 157.1 | 7.6e-49 | 11 | 137 | 3 | 128 |
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.. 95 pGfrFhPt+ee++++yL++ ++gkkl++ ++i++v++y ++PwdLp+++k +e+ewyfF++rd+++ +g r+nr+t++g+Wkatg+d+++ s+ XP_020685308.2 11 PGFRFHPTEEEILDFYLRRAAAGKKLNV-DIITTVNLYLYDPWDLPAMAKMGEREWYFFVPRDRRQGNGGRPNRTTERGFWKATGSDRHIRSSvd 104 9***************************.99***************9889999**************************************9887 PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrl 128 ++l+glkktLv+y+grap+g+ktdW+m+eyrl XP_020685308.2 105 PRRLIGLKKTLVYYRGRAPRGTKTDWIMNEYRL 137 7889***************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 168 aa Download sequence |
MERKGSEIEL PGFRFHPTEE EILDFYLRRA AAGKKLNVDI ITTVNLYLYD PWDLPAMAKM 60 GEREWYFFVP RDRRQGNGGR PNRTTERGFW KATGSDRHIR SSVDPRRLIG LKKTLVYYRG 120 RAPRGTKTDW IMNEYRLPDA SNSFGSAPTP KVCISFSLRL KKNDAVSN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G17040.1 | 2e-72 | NAC family protein |