PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020685153.2
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family GRAS
Protein Properties Length: 485aa    MW: 52786.6 Da    PI: 5.0424
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020685153.2genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS303.16.9e-931044741373
            GRAS   1 lvelLlecAeavss..gdlelaqalLarlsel..aspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPil 91 
                     l++lL+++Aea++   +++ l + +Larl+el  +  +g++m+Rla +f++AL+  l++   e  +  ++s  +   ++  +aa +l++++sP++
  XP_020685153.2 104 LIHLLTAAAEALAGdqKSHDLSKVILARLKELlpSPASGSSMERLAGHFAKALNCLLVD--GEAED--NCSGIE---TTAITAASQLLQDMSPYV 191
                     689********9872255669***********9555566*******************9..33333..333333...457778999********* PP

            GRAS  92 kfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRp.egpp.slRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvak 184
                     +f+h+taNqaI+eav ge+rvHi+Dfdi++G+QW++Llqa+ s + ++pp +++iT+v + +++ +++++etg+ La fA+++g+pf+f     +
  XP_020685153.2 192 NFGHFTANQAIVEAVGGERRVHIVDFDIMEGAQWAPLLQAFMSMKnGPPPsHVKITAVTAGRKSASTAVQETGRMLAAFAASIGLPFSFAQCRLD 286
                     ****************************************99655155669*********9999***************************9999 PP

            GRAS 185 rledleleeLrvkpgEalaVnlvlqlhrll.desvsleserdevLklvkslsPkvvvvveqe....adhnsesFlerflealeyysalfdsleak 274
                     r  ++++ +L+v +gEa++ n++l+  + + ++++s++    ++L    +  +++v+vve+e    a  +++ Fl +f+e l+ ys+l d+lea+
  XP_020685153.2 287 RDGCFRPAALKVLRGEAIVFNCALHAPHHHhHSPASIR----SFLASAAEFGARLVTVVEEEgratAAVGKGGFLVGFMEELQRYSTLWDALEAG 377
                     **********************9876555404444455....5*******************6654455788*********************** PP

            GRAS 275 lpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveee.sgslvlgWkdrpLv 368
                     +p++s++r +vE+ ++g++i  +v  + ++   + e  e W+e++ +  F++v+ls +++ qaklll  ++ +gyrveee  + l+lgWk+r+Lv
  XP_020685153.2 378 FPKQSKAREMVENLVFGPRIAGAVEEAFRR--REDEVTECWSEWMAATDFQKVSLSFFNQWQAKLLLGLFN-EGYRVEEEaPNKLILGWKSRRLV 469
                     **********************99765554..556678*********************************.******77368889********* PP

            GRAS 369 svSaW 373
                     s+S+W
  XP_020685153.2 470 SASVW 474
                     ***** PP

Sequence ? help Back to Top
Protein Sequence    Length: 485 aa     Download sequence    
MDVAMANAAD LYYSGYNAAA TSNVGWLNWS PAIGWLSISP EEDIHDEKEA MAWQYSDDYA  60
LARSSPEMLD HWSSSNVSDM TLSSAEGTPA EEPLQLSSDK GIRLIHLLTA AAEALAGDQK  120
SHDLSKVILA RLKELLPSPA SGSSMERLAG HFAKALNCLL VDGEAEDNCS GIETTAITAA  180
SQLLQDMSPY VNFGHFTANQ AIVEAVGGER RVHIVDFDIM EGAQWAPLLQ AFMSMKNGPP  240
PSHVKITAVT AGRKSASTAV QETGRMLAAF AASIGLPFSF AQCRLDRDGC FRPAALKVLR  300
GEAIVFNCAL HAPHHHHHSP ASIRSFLASA AEFGARLVTV VEEEGRATAA VGKGGFLVGF  360
MEELQRYSTL WDALEAGFPK QSKAREMVEN LVFGPRIAGA VEEAFRRRED EVTECWSEWM  420
AATDFQKVSL SFFNQWQAKL LLGLFNEGYR VEEEAPNKLI LGWKSRRLVS ASVWSARPPP  480
AVADD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G08250.11e-113GRAS family protein