PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020684852.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | WRKY | ||||||||
Protein Properties | Length: 158aa MW: 18462.6 Da PI: 9.2631 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 105.4 | 3e-33 | 80 | 138 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK vk+++fprsYYrCt+++C+vkk+v+r + d+++v++tYeg H+h+ XP_020684852.1 80 LDDGYRWRKYGQKAVKNNNFPRSYYRCTHKDCSVKKQVQRLSMDEEIVVTTYEGVHTHP 138 59********************************************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 158 aa Download sequence |
MENYNLLLAS NHSSSSNNSY LLQSSHADPS VLSESQEEEK KQESYDERPD KEKKKSTAKI 60 ANKIRKPRFA FQTRSKVDVL DDGYRWRKYG QKAVKNNNFP RSYYRCTHKD CSVKKQVQRL 120 SMDEEIVVTT YEGVHTHPVV KCTDNFENIL NQMQIYSS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G13080.1 | 4e-54 | WRKY family protein |