PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020684830.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | NF-YC | ||||||||
Protein Properties | Length: 169aa MW: 19373.8 Da PI: 5.5534 | ||||||||
Description | NF-YC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YC | 170.4 | 2.1e-53 | 40 | 141 | 2 | 100 |
NF-YC 2 lksfwekq...iekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflv 93 l++fw++q ie+++dfkn++lPlarikki+kadedv+mi+aeaPv++++ace+fil+lt rsw haeenkrrtl+k+diaaa+trtd+fdflv XP_020684830.1 40 LQMFWADQyreIEQTSDFKNQSLPLARIKKIMKADEDVRMIAAEAPVVFARACEMFILDLTHRSWAHAEENKRRTLQKNDIAAAITRTDVFDFLV 134 89****99999************************************************************************************ PP NF-YC 94 divprde 100 divpr+e XP_020684830.1 135 DIVPREE 141 *****97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 169 aa Download sequence |
MDQQGHGSQA PMGVGASVPY QAYPQLYHHQ QQQQQQQQHL QMFWADQYRE IEQTSDFKNQ 60 SLPLARIKKI MKADEDVRMI AAEAPVVFAR ACEMFILDLT HRSWAHAEEN KRRTLQKNDI 120 AAAITRTDVF DFLVDIVPRE EGNEDIGRPS VMTAPAPAGD PLAYYYIQQ |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 112 | 118 | RRTLQKN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G56170.1 | 5e-64 | NF-YC family protein |