PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020684732.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family NAC
Protein Properties Length: 331aa    MW: 37091 Da    PI: 6.7459
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020684732.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM169.69.8e-53231501128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 
                     lppGfrFhPtdeelv++yL+ kv + +l     i evd++++ePw+Lp+++k +e+ewyfFs rd+ky+tg r+nrat +gyWkatgkd+ev+++
  XP_020684732.1  23 LPPGFRFHPTDEELVTFYLASKVFNGSLCG-VDIVEVDLNRCEPWELPEAAKMGEREWYFFSLRDRKYPTGLRTNRATGAGYWKATGKDREVVAA 116
                     79*************************777.34***************988999**************************************998 PP

             NAM  96 .kgelvglkktLvfykgrapkgektdWvmheyrl 128
                      +g+lvg+kktLvfykgrap+gekt+Wv+heyrl
  XP_020684732.1 117 aTGALVGMKKTLVFYKGRAPRGEKTRWVLHEYRL 150
                     78999***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 331 aa     Download sequence    
MNTMGGEFVW EVFAEEVGGE HGLPPGFRFH PTDEELVTFY LASKVFNGSL CGVDIVEVDL  60
NRCEPWELPE AAKMGEREWY FFSLRDRKYP TGLRTNRATG AGYWKATGKD REVVAAATGA  120
LVGMKKTLVF YKGRAPRGEK TRWVLHEYRL HGDFSFRHAC KEEWVICRIF HKGGGDHKKN  180
AYLPNCTYLL DPSSSSLNSC FSPLLEYPQT LENPIQSLLQ NRHLPHFTQT LENPSVLFPF  240
PVSQPFPTTG HLHSLFKSPL PAKEQINSAP GQEESFSNWL ESCLQNPSFS SYDMNHNHLG  300
LPPIQVGGAP VLHDTPFLGP SSALQSGPLV P
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G76420.12e-93NAC family protein