PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020684673.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family Nin-like
Protein Properties Length: 332aa    MW: 36910.4 Da    PI: 7.628
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020684673.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK64.81.4e-204590348
          RWP-RK  3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRk 48
                     +++++d+ k+Fslpi++AA+ Lgv+ +vLKriCR++GI RWP+Rk
  XP_020684673.1 45 GKLTINDITKFFSLPIAEAASILGVSDSVLKRICRENGIVRWPYRK 90
                    5799*****************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 332 aa     Download sequence    
MYFTSGAEPS SHQTRLPENP ESGGKAVSLP GANHPSLRPP PTRSGKLTIN DITKFFSLPI  60
AEAASILGVS DSVLKRICRE NGIVRWPYRK FLAGKNVEII NKDGTREKTK EVHELSKLAK  120
DKVHVSTLST STTATSLAET FSSDIDNKAP GLVQDTKKLQ KGVHMSGQVF HKQGNKFVQY  180
GWSGIPQPLQ PKNISTYMDE FEYGFPSNGL SSVSTKWWID SSGEDSRMLQ GQSMDNNLDK  240
EETSLASNET NYNYMMDEET ESSLEERAIL NEPSASLCFL RKRSAEYGQE ALEDRISKHC  300
DSSRLTKRQR LLLSQVFNAP LPGQSKDTLS NL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35590.15e-10Nin-like family protein