PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020684392.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | ERF | ||||||||
Protein Properties | Length: 210aa MW: 22976.5 Da PI: 6.5286 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 59 | 1.2e-18 | 53 | 103 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 + y+GVr ++ +g+Wv+eIr p++ + r++lg+f t+e+Aa+a++ a+++++g XP_020684392.1 53 PVYRGVRMRS-WGKWVSEIRQPRK---KSRIWLGTFPTPEMAARAHDVAALSIKG 103 68*****998.**********843...6***********************9987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 210 aa Download sequence |
MTDQGSSSEQ ESSPSSSSSS NRAPKANQSP DSDQVGRAAA DTVKRSRDRS KHPVYRGVRM 60 RSWGKWVSEI RQPRKKSRIW LGTFPTPEMA ARAHDVAALS IKGSAAILNF PELAASLPRP 120 ATLSPQDVQA AAAKAAIMEP SPPAILSPAS LLSPDELGEI VELPRLGTDF VFQETVHSWP 180 FSWSESTEDS TLFSDSLWPP NNFESHSWNY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G11590.1 | 5e-56 | ERF family protein |