PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_020684327.1

Organism

Dendrobium catenatum

Taxonomic ID

906689

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium

Family

NAC

Protein Properties

Length: 624aa MW: 68834.7 Da PI: 4.5813

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_020684327.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	164.4	4e-51	12	143	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 lp GfrF+Ptdeel+++yLk+k++g+ + vi+evd++k+ePwdLp k +k+++ ew+fF+++d+ky++g+r+nrat++gyWkatgkd+++ XP_020684327.1 12 LPLGFRFRPTDEELLSHYLKRKINGRIKADSAVIPEVDVCKYEPWDLPeKsIIKSGDPEWFFFAPKDRKYPNGQRSNRATEAGYWKATGKDRPIR 106 699********************99777788**********95346778889********************************* PP NAM 94 sk..kgelvglkktLvfykgrapkgektdWvmheyrl 128 ++ ++ +g+kktLvfy+grapkge+t W++heyr XP_020684327.1 107 TRapSSMPIGMKKTLVFYRGRAPKGERTGWIIHEYRT 143 99888888*************************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 624 aa Download sequence
MATLEVIPLE SLPLGFRFRP TDEELLSHYL KRKINGRIKA DSAVIPEVDV CKYEPWDLPE 60 KSIIKSGDPE WFFFAPKDRK YPNGQRSNRA TEAGYWKATG KDRPIRTRAP SSMPIGMKKT 120 LVFYRGRAPK GERTGWIIHE YRTVEPEFDK GGFVLCRLFK KPEENIGTSN ADKIDGSNLS 180 PDIIWSSPDT TAQGDDALYE TTPLHQEIVP LNWPETVDES MTKSEETYSY SDITADIGAS 240 GIYMDNLKDD PDPSNLSSLN IGFEQNDSDL FYYNSPSDMS YLHFDDNGVG AFLKDEDDEV 300 AKLLDSILVS DEECLPEFYK FLGNTTEAVP SAQVGLIKQE TFLDNTSGID IIIGDNADVE 360 VLLPHDAPGL AASYQMSGSI SPSSHFMPLT SNSYNVLGTQ FDSFIKNSTA NELQSMASFN 420 GNAMFEGLEA SETLSSAADL SQDLFKNEPN PSGEDNSTGI GIKLRSSRKR TSGNPNQLGS 480 QGMAAHGNAF RRIRLQTSLR VGSTALTNRN SSSSNGDHDE KAKISECGNN AEFEIPKMAY 540 CGPSENEDAA SPIERKLTSS NNSQTPDAVL RLRTKEPNYL YAKPEGTSKE APKAASINFG 600 RVTVVLPVIL CVLCIGIGWF FSYR

Sequence ? help Back to Top

Protein Sequence Length: 624 aa Download sequence

MATLEVIPLE SLPLGFRFRP TDEELLSHYL KRKINGRIKA DSAVIPEVDV CKYEPWDLPE  60
KSIIKSGDPE WFFFAPKDRK YPNGQRSNRA TEAGYWKATG KDRPIRTRAP SSMPIGMKKT  120
LVFYRGRAPK GERTGWIIHE YRTVEPEFDK GGFVLCRLFK KPEENIGTSN ADKIDGSNLS  180
PDIIWSSPDT TAQGDDALYE TTPLHQEIVP LNWPETVDES MTKSEETYSY SDITADIGAS  240
GIYMDNLKDD PDPSNLSSLN IGFEQNDSDL FYYNSPSDMS YLHFDDNGVG AFLKDEDDEV  300
AKLLDSILVS DEECLPEFYK FLGNTTEAVP SAQVGLIKQE TFLDNTSGID IIIGDNADVE  360
VLLPHDAPGL AASYQMSGSI SPSSHFMPLT SNSYNVLGTQ FDSFIKNSTA NELQSMASFN  420
GNAMFEGLEA SETLSSAADL SQDLFKNEPN PSGEDNSTGI GIKLRSSRKR TSGNPNQLGS  480
QGMAAHGNAF RRIRLQTSLR VGSTALTNRN SSSSNGDHDE KAKISECGNN AEFEIPKMAY  540
CGPSENEDAA SPIERKLTSS NNSQTPDAVL RLRTKEPNYL YAKPEGTSKE APKAASINFG  600
RVTVVLPVIL CVLCIGIGWF FSYR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G33060.1	4e-74	NAC family protein