PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020684160.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | NF-YA | ||||||||
Protein Properties | Length: 346aa MW: 38114.4 Da PI: 9.2654 | ||||||||
Description | NF-YA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | CBFB_NFYA | 98.2 | 8.6e-31 | 203 | 260 | 1 | 58 |
CBFB_NFYA 1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 +ep+YVNaKQy++Il+RRq+Rakle ++k +++ rkpylheSRh hA++R+Rg+gGrF XP_020684160.1 203 EEPIYVNAKQYKAILRRRQHRAKLEFHNKSSKNPRKPYLHESRHLHAMKRARGTGGRF 260 69*******************************************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 346 aa Download sequence |
MSCENRKGTE MQNMNNKDSQ QNLVQSTCNY LSNSFPWWNS GGPHIVLYPT TTNLYANANS 60 LALNQIKQVG NQNQEQESSS TQSTGHSHHE VSGKREDNLN ERCVSAQSGA IHDKADEKGD 120 ERMHEKLEQG HPKQVLSAGS TQFFYAPQKL DCNQSLAYLP YAYSDAHYAG VMAAYGSHAA 180 IHPQMMGLSP CSRVALPHQP AGEEPIYVNA KQYKAILRRR QHRAKLEFHN KSSKNPRKPY 240 LHESRHLHAM KRARGTGGRF LNTKKIQDAS GLHDFAGSEP PQPGRTVGLH NGAAISSATP 300 TCSEITSVSN DGGQVVKLHS QAHLGFTYGC DGLFNNGTKL RVPVAR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G54160.1 | 3e-35 | NF-YA family protein |