PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020684152.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family NF-YA
Protein Properties Length: 347aa    MW: 38242.5 Da    PI: 9.2654
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020684152.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA98.28.7e-31204261158
       CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                     +ep+YVNaKQy++Il+RRq+Rakle ++k +++ rkpylheSRh hA++R+Rg+gGrF
  XP_020684152.1 204 EEPIYVNAKQYKAILRRRQHRAKLEFHNKSSKNPRKPYLHESRHLHAMKRARGTGGRF 261
                     69*******************************************************9 PP

Sequence ? help Back to Top
Protein Sequence    Length: 347 aa     Download sequence    
MSCENRKGTE MQNMNNKDSQ QNLVQSTCNY LSNSFPWWNS GGPHIVLYPT TTNLYANANS  60
LALNQIKQVG NQNQEQESSS TQSTGHSHHE VSGKREDNLN ERCVSAQSGA IHDKADEKGD  120
ERMHEKLEQG HPKQVLSAGS TQFFYAPQKL DCNQSLQAYL PYAYSDAHYA GVMAAYGSHA  180
AIHPQMMGLS PCSRVALPHQ PAGEEPIYVN AKQYKAILRR RQHRAKLEFH NKSSKNPRKP  240
YLHESRHLHA MKRARGTGGR FLNTKKIQDA SGLHDFAGSE PPQPGRTVGL HNGAAISSAT  300
PTCSEITSVS NDGGQVVKLH SQAHLGFTYG CDGLFNNGTK LRVPVAR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G54160.12e-35NF-YA family protein