PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020684152.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | NF-YA | ||||||||
Protein Properties | Length: 347aa MW: 38242.5 Da PI: 9.2654 | ||||||||
Description | NF-YA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | CBFB_NFYA | 98.2 | 8.7e-31 | 204 | 261 | 1 | 58 |
CBFB_NFYA 1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 +ep+YVNaKQy++Il+RRq+Rakle ++k +++ rkpylheSRh hA++R+Rg+gGrF XP_020684152.1 204 EEPIYVNAKQYKAILRRRQHRAKLEFHNKSSKNPRKPYLHESRHLHAMKRARGTGGRF 261 69*******************************************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 347 aa Download sequence |
MSCENRKGTE MQNMNNKDSQ QNLVQSTCNY LSNSFPWWNS GGPHIVLYPT TTNLYANANS 60 LALNQIKQVG NQNQEQESSS TQSTGHSHHE VSGKREDNLN ERCVSAQSGA IHDKADEKGD 120 ERMHEKLEQG HPKQVLSAGS TQFFYAPQKL DCNQSLQAYL PYAYSDAHYA GVMAAYGSHA 180 AIHPQMMGLS PCSRVALPHQ PAGEEPIYVN AKQYKAILRR RQHRAKLEFH NKSSKNPRKP 240 YLHESRHLHA MKRARGTGGR FLNTKKIQDA SGLHDFAGSE PPQPGRTVGL HNGAAISSAT 300 PTCSEITSVS NDGGQVVKLH SQAHLGFTYG CDGLFNNGTK LRVPVAR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G54160.1 | 2e-35 | NF-YA family protein |