PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020684090.2
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family WRKY
Protein Properties Length: 336aa    MW: 35954.8 Da    PI: 10.3858
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020684090.2genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY99.32.5e-31263321259
                     --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     +D+y+WrKYGqK++kgs++pr+YY+C+s  gCp++k+ver+ +dp+++++tY geH+h+
  XP_020684090.2 263 SDEYSWRKYGQKPIKGSPYPRGYYKCSSLrGCPARKHVERAPDDPSMLIVTYDGEHRHS 321
                     69*************************998****************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 336 aa     Download sequence    
MAVDLIGYAK MEDKMSIQDA AAAGFRGMEN LIFHLNRHQH KSSVSSTSAS SEANIDCREI  60
AEHTVSKFKK MISILNRTGH ARFRRGPAGV FASSVVTTPP QPSVSLHPTP AMTAPVVQLQ  120
GLTLDFTKSS PVSGASKVDL NIAAATSAKY IKNSFSMSAP MSSTNSSFLS SITGDGSVSN  180
GREGGSSSVL LAPAPAISAG GAVRSKPPLS SASKKQCPSH AHSEDIAGRF AGGRCHCSKR  240
RKNRVKKTIR VPAISSKMAD IPSDEYSWRK YGQKPIKGSP YPRGYYKCSS LRGCPARKHV  300
ERAPDDPSML IVTYDGEHRH SQPSDPIVSD NTHCKI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24570.13e-96WRKY family protein