PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020684068.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family GRAS
Protein Properties Length: 585aa    MW: 65017.2 Da    PI: 4.8192
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020684068.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS454.56.8e-1392165852374
            GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshl 96 
                     ++lL++cA ++s+g+ e+aqa++ +l+++++ +gdp qRlaay++e+Laar+++s+++lykal+++e +   ++++l+a+++++e++P++kf+++
  XP_020684068.1 216 KQLLFDCASVLSDGNVEEAQAMIIELRQMVAIQGDPPQRLAAYLVEGLAARIVSSGHGLYKALKCKEPP---TTDQLSAMQILFEICPCFKFGFM 307
                     689*****************************************************************9...89********************* PP

            GRAS  97 taNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledl 189
                     +aN aI ea++ eervHi+Dfdi+qG Q+++L+qaL++R+ +pp+lRiTgv++pes+      le +g+rL+k+Aee gvpf+f++ +a +++d+
  XP_020684068.1 308 AANGAIAEAFKDEERVHILDFDINQGSQYITLIQALSARQTKPPHLRITGVDDPESVqrTIGGLEVIGQRLEKLAEEAGVPFKFQA-IAAKTADV 401
                     *******************************************************99777789***********************.6999**** PP

            GRAS 190 eleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerik 284
                     ++++L+++pgEal+Vn+++qlh+++desvs+ ++rd++L++vksl+Pk+v+vveq++++n+++F+ rf+e  +yysa+f+sl+a+lpres +r++
  XP_020684068.1 402 TPSMLDCRPGEALVVNFAFQLHHMPDESVSTVNQRDRLLRMVKSLNPKLVTVVEQDVNTNTAPFFPRFVEVYNYYSAVFESLDATLPRESPDRMN 496
                     *********************************************************************************************** PP

            GRAS 285 vErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                     vEr++l+r+ivn+vacega+r+er e ++kWr+r+++aGF + pls++++  +++ll+ + ++ y+++ee+g+l++gW+d+ Lv++SaW+
  XP_020684068.1 497 VERQCLARDIVNIVACEGADRIERYEAAGKWRARMTMAGFVSCPLSSYVNGAIRSLLKSYCDR-YKIKEENGALYFGWEDKILVVASAWK 585
                     *************************************************************66.*************************8 PP

Sequence ? help Back to Top
Protein Sequence    Length: 585 aa     Download sequence    
MSLMSSADSS TSCSEPGCYG HKSNDSTGLS SQIFTSDKQM LHYGLPSYQS NIYGQQYFTN  60
ASTGLNPLNS IHLSSSVHGN LHRPQAFSGT YQLIGNGRSS VIQDNPYNAC FAAVRHQTSS  120
VSNNYQQAAR SLLESQSPEP EMDFEEIDIT LKLQELERAL LSENDEDFTD LGQEMFMDED  180
WTESIKSLMT PNSPKESSSD SNISSISSNR EMRTSKQLLF DCASVLSDGN VEEAQAMIIE  240
LRQMVAIQGD PPQRLAAYLV EGLAARIVSS GHGLYKALKC KEPPTTDQLS AMQILFEICP  300
CFKFGFMAAN GAIAEAFKDE ERVHILDFDI NQGSQYITLI QALSARQTKP PHLRITGVDD  360
PESVQRTIGG LEVIGQRLEK LAEEAGVPFK FQAIAAKTAD VTPSMLDCRP GEALVVNFAF  420
QLHHMPDESV STVNQRDRLL RMVKSLNPKL VTVVEQDVNT NTAPFFPRFV EVYNYYSAVF  480
ESLDATLPRE SPDRMNVERQ CLARDIVNIV ACEGADRIER YEAAGKWRAR MTMAGFVSCP  540
LSSYVNGAIR SLLKSYCDRY KIKEENGALY FGWEDKILVV ASAWK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G21450.10.0GRAS family protein