PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020684026.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | WRKY | ||||||||
Protein Properties | Length: 339aa MW: 37499.7 Da PI: 4.573 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 97.8 | 6.9e-31 | 128 | 185 | 3 | 59 |
-SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 D ++WrKYGqK++kgs++pr+YYrC+s+ gC ++k+vers++d+ +++itY+geHnh+ XP_020684026.1 128 DLWAWRKYGQKPIKGSPYPRGYYRCSSSkGCLARKQVERSRTDQGMFVITYTGEHNHP 185 99************************998****************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 339 aa Download sequence |
MSSSWWLPVE GDEDGWDLYA VVRSCRPAKS SASVPPLPPW EPLILQSTEP LLPSHRTDLI 60 DSSNAVQELE ELCKPFLPTT QQPKFQLSPS SASTATVPPR SQFPRTKRRK NQQKRMVCQV 120 LADGLSGDLW AWRKYGQKPI KGSPYPRGYY RCSSSKGCLA RKQVERSRTD QGMFVITYTG 180 EHNHPLPTHR NSLAGSTRQK FPSAGGEGGG GNLPEPSTSA GEGSVRLSPN TPLTSGTEED 240 LFRPRKKKKQ EGSTDEDEEE EEAEVGEEED ELDMLLVEDM ELVGEDEFLF MGFEELQVSS 300 SPAVDELKVS SSPAVHELLS WDGEPQQTGT PPWPPAMAD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G01250.1 | 3e-59 | WRKY family protein |