PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020683781.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family ERF
Protein Properties Length: 289aa    MW: 31823.9 Da    PI: 5.2468
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020683781.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.91.4e-19142192255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr+++ +g+++AeIrdp+ +g   r++lg+f+ta eAa+a+++a+ +++g
  XP_020683781.1 142 RYRGVRQRP-WGKFAAEIRDPKRRG--SRVWLGTFDTAVEAARAYDRAAFQMRG 192
                     7********.**********96554..*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 289 aa     Download sequence    
MMATEQSFAL ELIREHLFGD AAASLEDLLI GLPTPPPATT HSYGDLNISD YLEQTETYYN  60
CPVPVPAASS VQAPVPAPTA APEPYIGGFR FREPAQTMIR FGGDRADIGL TLNIPHAAAP  120
KVEWIDGSDG DLRPPELFDF HRYRGVRQRP WGKFAAEIRD PKRRGSRVWL GTFDTAVEAA  180
RAYDRAAFQM RGSKAILNFP NEVGSSADWV RPAMAVEKRA REEEGEAARE VKRKREEESK  240
SSITSEGPLT PSTWSAVWEG ADVKGLFNLP PLSPLSPHPS LGFPQLLVI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51190.17e-27ERF family protein